Wilke, Claus O: search on Z-Library

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1

The biology of digital organisms

Claus O. Wilke, Christoph Adami

Journal:

Trends in Ecology & Evolution

Year:

2002

Language:

english

File:

PDF, 42 KB

english, 2002

2

Biophysical Models of Protein Evolution: Understanding the Patterns of Evolutionary Sequence Divergence

Echave, Julian, Wilke, Claus O.

Journal:

Annual Review of Biophysics

Year:

2017

Language:

english

File:

PDF, 709 KB

english, 2017

3

Experiments in Digital Evolution (Editors' Introduction to the Special Issue)

Adami, Christoph, Wilke, Claus O.

Journal:

Artificial Life

Year:

2004

Language:

english

File:

PDF, 103 KB

english, 2004

4

Avida: A Software Platform for Research in Computational Evolutionary Biology

Ofria, Charles, Wilke, Claus O.

Journal:

Artificial Life

Year:

2004

Language:

english

File:

PDF, 201 KB

english, 2004

5

PeptideBuilder: A simple Python library to generate model peptides

Tien, Matthew Z., Sydykova, Dariya K., Meyer, Austin G., Wilke, Claus O.

Journal:

Year:

2013

Language:

english

File:

PDF, 2.48 MB

english, 2013

6

Molecular Interactions Between Human Cartilaginous Endplates and Nucleus Pulposus Cells

Neidlinger-Wilke, Cornelia, Boldt, Antje, Brochhausen, Christoph, Galbusera, Fabio, Carstens, Claus, Copf, Franz, Schultheiss, Markus, Lazary, Aron, Brayda-Bruno, Marco, Ignatius, Anita, Wilke, Hans-J

Journal:

Year:

2014

Language:

english

File:

PDF, 1.89 MB

english, 2014

7

Interaction between Directional Epistasis and Average Mutational Effects

Claus O. Wilke and Christoph Adami

Journal:

Proceedings Biological Sciences

Year:

2001

Language:

english

File:

PDF, 854 KB

english, 2001

8

Optimal adaptive performance and delocalization in NK fitness landscapes

Paulo R.A Campos, Christoph Adami, Claus O Wilke

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

2002

Language:

english

File:

PDF, 136 KB

english, 2002

9

Sensory Information and Encounter Rates of Interacting Species

Hein, Andrew M., McKinley, Scott A., Wilke, Claus O.

Journal:

PLoS Computational Biology

Year:

2013

Language:

english

File:

PDF, 1.06 MB

english, 2013

10

Discerning evolutionary trends in post-translational modification and the effect of intrinsic disorder: Analysis of methylation, acetylation and ubiquitination sites in human proteins

Narasumani, Mohanalakshmi, Harrison, Paul M., Wilke, Claus O.

Journal:

PLoS Computational Biology

Year:

2018

Language:

english

File:

PDF, 4.30 MB

english, 2018

11

Time dependence of evolutionary metrics during the 2009 pandemic influenza virus outbreak

Meyer, Austin G., Spielman, Stephanie J., Bedford, Trevor, Wilke, Claus O.

Journal:

Virus Evolution

Year:

2015

Language:

english

File:

PDF, 843 KB

english, 2015

12

SPIE Proceedings [SPIE SPIE Astronomical Telescopes + Instrumentation - Marseille, France (Monday 23 June 2008)] Observatory Operations: Strategies, Processes, and Systems II - Improving the Wendelstein Observatory for a 2m-class telescope

Hopp, Ulrich, Brissenden, Roger J., Silva, David R., Bender, Ralf, Goessl, Claus, Mitsch, Wolfgang, Barwig, Heinz, Riffeser, Arno, Lang, Florian, Wilke, Silona, Ries, Christoph, Grupp, Frank, Relke, H

Year:

2008

Language:

english

File:

PDF, 526 KB

english, 2008

13

The low spike density of HIV may have evolved because of the effects of T helper cell depletion on affinity maturation

Amitai, Assaf, Chakraborty, Arup K., Kardar, Mehran, Wilke, Claus O.

Journal:

PLoS Computational Biology

Year:

2018

Language:

english

File:

PDF, 2.07 MB

english, 2018

14

Stability and the Evolvability of Function in a Model Protein

Bloom, Jesse D., Wilke, Claus O., Arnold, Frances H., Adami, Christoph

Journal:

Biophysical Journal

Year:

2004

Language:

english

File:

PDF, 170 KB

english, 2004

15

Selection for mutational robustness in finite populations

Robert Forster, Christoph Adami, Claus O. Wilke

Journal:

Journal of Theoretical Biology

Year:

2006

Language:

english

File:

PDF, 546 KB

english, 2006

16

Evolution of mutational robustness

Claus O. Wilke, Christoph Adami

Journal:

Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis

Year:

2003

Language:

english

File:

PDF, 135 KB

english, 2003

17

Viral evolution under the pressure of an adaptive immune system: Optimal mutation rates for viral escape

Christel Kamp, Claus O. Wilke, Christoph Adami, Stefan Bornholdt

Journal:

Year:

2002

Language:

english

File:

PDF, 99 KB

english, 2002

18

The evolutionary consequences of erroneous protein synthesis

Allan Drummond, D., Wilke, Claus O.

Journal:

Nature Reviews Genetics

Year:

2009

Language:

english

File:

PDF, 450 KB

english, 2009

19

The genotype-phenotype map of an evolving digital organism

Fortuna, Miguel A., Zaman, Luis, Ofria, Charles, Wagner, Andreas, Wilke, Claus O.

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 1.51 MB

english, 2017

20

Strengthening of laterality of verbal and visuospatial functions during childhood and adolescence

Regula Everts, Karen Lidzba, Marko Wilke, Claus Kiefer, Michela Mordasini, Gerhard Schroth, Walter Perrig, Maja Steinlin

Journal:

Human Brain Mapping

Year:

2009

Language:

english

File:

PDF, 298 KB

english, 2009

21

Divergent allele advantage at human MHC genes: signatures of past and ongoing selection

Pierini, Federica, Lenz, Tobias L, Wilke, Claus

Journal:

Molecular Biology and Evolution

Year:

2018

Language:

english

File:

PDF, 1.42 MB

english, 2018

22

Moderate Amounts of Epistasis are Not Evolutionarily Stable in Small Populations

Sydykova, Dariya K., LaBar, Thomas, Adami, Christoph, Wilke, Claus O.

Journal:

Journal of Molecular Evolution

Year:

2020

File:

PDF, 1.79 MB

2020

23

Computational Protein Design Quantifies Structural Constraints on Amino Acid Covariation

Ollikainen, Noah, Kortemme, Tanja, Wilke, Claus O.

Journal:

PLoS Computational Biology

Year:

2013

Language:

english

File:

PDF, 3.34 MB

english, 2013

24

Evolution of the Division of Labor between Genes and Enzymes in the RNA World

Boza, Gergely, Szilágyi, András, Kun, Ádám, Santos, Mauro, Szathmáry, Eörs, Wilke, Claus O.

Journal:

PLoS Computational Biology

Year:

2014

Language:

english

File:

PDF, 1.95 MB

english, 2014

25

Computational and functional analysis of the virus-receptor interface reveals host range trade-offs in New World arenaviruses

Kerr, Scott A., Jackson, Eleisha L., Lungu, Oana I., Meyer, Austin G., Demogines, Ann, Ellington, Andrew D., Georgiou, George, Wilke, Claus O., Sawyer, Sara L.

Journal:

Journal of Virology

Year:

2015

File:

PDF, 2.18 MB

2015

26

Replication at Periodically Changing Multiplicity of Infection Promotes Stable Coexistence of Competing Viral Populations

Claus O. Wilke, Daniel D. Reissig and Isabel S. Novella

Journal:

Year:

2004

Language:

english

File:

PDF, 1.17 MB

english, 2004

27

New experimental and theoretical approaches towards the understanding of the emergence of viral infections || Methods of modelling viral disease dynamics across the within- and between-host scales: the impact of virus dose on host population immunity

Shelby H. Steinmeyer, Claus O. Wilke and Kim M. Pepin

Journal:

Philosophical Transactions Biological Sciences

Year:

2010

Language:

english

File:

PDF, 2.16 MB

english, 2010

28

Contact Density Affects Protein Evolutionary Rate from Bacteria to Animals

Tong Zhou, D. Allan Drummond, Claus O. Wilke

Journal:

Journal of Molecular Evolution

Year:

2008

Language:

english

File:

PDF, 493 KB

english, 2008

29

10.1038/35085569

Wilke, Claus O., Wang, Jia Lan, Ofria, Charles, Lenski, Richard E., Adami, Christoph

Journal:

Year:

2001

Language:

english

File:

PDF, 260 KB

english, 2001

30

West Nile Virus Experimental Evolution in vivo and the Trade-off Hypothesis

Deardorff, Eleanor R., Fitzpatrick, Kelly A., Jerzak, Greta V. S., Shi, Pei-Yong, Kramer, Laura D., Ebel, Gregory D., Wilke, Claus O.

Journal:

Year:

2011

Language:

english

File:

PDF, 298 KB

english, 2011

31

Sequence amplification via cell passaging creates spurious signals of positive adaptation in influenza virus H3N2 hemagglutinin

McWhite, Claire D., Meyer, Austin G., Wilke, Claus O.

Journal:

Virus Evolution

Year:

2016

Language:

english

File:

PDF, 1.33 MB

english, 2016

32

Phenotypic Heterogeneity and the Evolution of Bacterial Life Cycles

van Gestel, Jordi, Nowak, Martin A., Wilke, Claus O.

Journal:

PLoS Computational Biology

Year:

2016

Language:

english

File:

PDF, 12.86 MB

english, 2016

33

A Bayesian framework for inferring the influence of sequence context on point mutations

Ling, Guy, Miller, Danielle, Nielsen, Rasmus, Stern, Adi, Wilke, Claus

Journal:

Molecular Biology and Evolution

Year:

2019

File:

PDF, 1.44 MB

2019

34

Predicting the landscape of recombination using deep learning

Adrion, Jeffrey R, Galloway, Jared G, Kern, Andrew D, Wilke, Claus

Journal:

Molecular Biology and Evolution

Year:

2020

Language:

english

File:

PDF, 7.47 MB

english, 2020

35

Sparse epistatic patterns in the evolution of terpene synthases

Ballal, Aditya, Laurendon, Caroline, Salmon, Melissa, Vardakou, Maria, Cheema, Jitender, Defernez, Marianne, OâMaille, Paul E, Morozov, Alexandre V, Wilke, Claus

Journal:

Molecular Biology and Evolution

Year:

2020

File:

PDF, 3.44 MB

2020

36

Assessment of Raman Spectroscopy for Reducing Unnecessary Biopsies for Melanoma Screening

Zhang, Yao, Moy, Austin J., Feng, Xu, Nguyen, Hieu T. M., Sebastian, Katherine R., Reichenberg, Jason S., Wilke, Claus O., Markey, Mia K., Tunnell, James W.

Journal:

Year:

2020

File:

PDF, 842 KB

2020

37

Frequency-dependent selection in a periodic environment

Robert Forster, Claus O. Wilke

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

2007

Language:

english

File:

PDF, 384 KB

english, 2007

38

Reduced stability of mRNA secondary structure near the translation-initiation site in dsDNA viruses

Tong Zhou, Claus O Wilke

Journal:

BMC Evolutionary Biology

Year:

2011

Language:

english

File:

PDF, 317 KB

english, 2011

39

Compensatory mutations cause excess of antagonistic epistasis in RNA secondary structure folding

Claus O Wilke, Richard E Lenski, Christoph Adami

Journal:

BMC Evolutionary Biology

Year:

2003

Language:

english

File:

PDF, 463 KB

english, 2003

40

Modulation of cytotoxic drug activity by dipyridamole

Schmoll, Hans-Joachim, Harstrick, Andreas, Köhne-Wömpner, Claus-Henning, Schöber, Christoph, Wilke, Hansjochen, Poliwoda, Hubert

Journal:

Cancer Treatment Reviews

Year:

1990

Language:

english

File:

PDF, 722 KB

english, 1990

41

Sinonasal anatomic variants and asthma are associated with faster development of chronic rhinosinusitis in patients with allergic rhinitis

Sedaghat, Ahmad R., Gray, Stacey T., Chambers, Kyle J., Wilke, Claus O., Caradonna, David S.

Journal:

International Forum of Allergy & Rhinology

Year:

2013

Language:

english

File:

PDF, 556 KB

english, 2013

42

Bringing Molecules Back into Molecular Evolution

Wilke, Claus O., Kosakovsky Pond, Sergei L.

Journal:

PLoS Computational Biology

Year:

2012

Language:

english

File:

PDF, 79 KB

english, 2012

43

Dissecting the roles of local packing density and longer-range effects in protein sequence evolution

Shahmoradi, Amir, Wilke, Claus O.

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2016

Language:

english

File:

PDF, 704 KB

english, 2016

44

Beyond Thermodynamic Constraints: Evolutionary Sampling Generates Realistic Protein Sequence Variation

Jiang, Qian, Teufel, Ashley I., Jackson, Eleisha L., Wilke, Claus O.

Journal:

Year:

2018

Language:

english

File:

PDF, 211 KB

english, 2018

45

Building a mechanistic mathematical model of hepatitis C virus entry

Kalemera, Mphatso, Mincheva, Dilyana, Grove, Joe, Illingworth, Christopher J. R., Wilke, Claus O.

Journal:

PLoS Computational Biology

Year:

2019

Language:

english

File:

PDF, 2.94 MB

english, 2019

46

Imaging Chiral Materials with Photon-Induced Near-Field Electron Microscopy

Harvey, Tyler, Henke, Jan-Wilke, Kfir, Ofer, Feist, Armin, Ropers, Claus

Journal:

Microscopy and Microanalysis

Year:

2019

Language:

english

File:

PDF, 1.54 MB

english, 2019

47

Co-locality to co-functionality: Eukaryotic gene neighborhoods as a resource for function discovery

Foflonker, Fatima, Blaby-Haas, Crysten E, Wilke, Claus

Journal:

Molecular Biology and Evolution

Year:

2020

File:

PDF, 7.54 MB

2020

48

Synthesis and Structure of [Na(tmeda)2]⊕[HNi2(C2H)4]⊕

Dr. Klaus Richard Pörschke, Dr. Wolfgang Kleimann, Prof. Dr. Günther Wilke, Karl Heinz Claus, Prof. Dr. Carl Krüger

Journal:

Angewandte Chemie International Edition

Year:

1983

Language:

english

File:

PDF, 245 KB

english, 1983

49

INTERACTIONS BETWEEN EVOLUTIONARY PROCESSES AT HIGH MUTATION RATES

Thomas E. Keller, Claus O. Wilke, James J. Bull

Journal:

Year:

2012

Language:

english

File:

PDF, 718 KB

english, 2012

50

Effects of Population Size and Mutation Rate on the Evolution of Mutational Robustness

Santiago F. Elena, Claus O. Wilke, Charles Ofria and Richard E. Lenski

Journal:

Year:

2007

Language:

english

File:

PDF, 1.38 MB

english, 2007

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